STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTAC_LOCUS7212Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (1137 aa)    
Predicted Functional Partners:
TTAC_LOCUS338
Uncharacterized protein.
  
 0.999
TTAC_LOCUS5717
Uncharacterized protein.
  
 0.999
TTAC_LOCUS6881
RPOLD domain-containing protein.
  
 0.999
TTAC_LOCUS7991
TFIIS-type domain-containing protein.
   
 0.999
TTAC_LOCUS9130
Uncharacterized protein.
  
 0.999
TTAC_LOCUS232
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
    0.998
TTAC_LOCUS366
DUF663 domain-containing protein.
   
 
 0.998
TTAC_LOCUS6375
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.998
TTAC_LOCUS9126
Uncharacterized protein.
   
 0.997
A0A0R3X8X7
RPOLA_N domain-containing protein.
 
 0.997
Your Current Organism:
Hydatigera taeniaeformis
NCBI taxonomy Id: 6205
Other names: Cysticercus fasciolaris, H. taeniaeformis, Hydatigera himalayotaenia, Taenia crassicollis, Taenia taeniaeformis
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