TTAC_LOCUS9340 protein (Hydatigera taeniaeformis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TTAC_LOCUS9340

Uncharacterized protein. (98 aa)

Predicted Functional Partners:

TTAC_LOCUS9131

0.940

TTAC_LOCUS6927

0.802

TTAC_LOCUS25

0.606

A0A0R3X9J3

0.574

TTAC_LOCUS2243

0.571

TTAC_LOCUS7047

0.571

TTAC_LOCUS829

0.569

TTAC_LOCUS1520

0.531

TTAC_LOCUS1194

0.528

A0A0R3WVP4

0.499

Your Current Organism:

Hydatigera taeniaeformis

NCBI taxonomy Id: 6205
Other names: Cysticercus fasciolaris, H. taeniaeformis, Hydatigera himalayotaenia, Taenia crassicollis, Taenia taeniaeformis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3WVP4	A0A0R3X9J3	A0A0R3WVP4	A0A0R3X9J3	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A0R3WVP4	TTAC_LOCUS2243	A0A0R3WVP4	A0A0R3WNB8	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A0R3WVP4	TTAC_LOCUS6927	A0A0R3WVP4	A0A0R3X184	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.586
A0A0R3WVP4	TTAC_LOCUS9340	A0A0R3WVP4	A0A0R3X741	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A0R3X9J3	A0A0R3WVP4	A0A0R3X9J3	A0A0R3WVP4	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A0R3X9J3	TTAC_LOCUS2243	A0A0R3X9J3	A0A0R3WNB8	Uncharacterized protein.	Uncharacterized protein.	0.573
A0A0R3X9J3	TTAC_LOCUS9340	A0A0R3X9J3	A0A0R3X741	Uncharacterized protein.	Uncharacterized protein.	0.574
TTAC_LOCUS1194	TTAC_LOCUS25	A0A0R3WKF5	A0A0R3WHK4	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.706
TTAC_LOCUS1194	TTAC_LOCUS9340	A0A0R3WKF5	A0A0R3X741	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.528
TTAC_LOCUS1520	TTAC_LOCUS9340	A0A0R3WL95	A0A0R3X741	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.531
TTAC_LOCUS2243	A0A0R3WVP4	A0A0R3WNB8	A0A0R3WVP4	Uncharacterized protein.	Uncharacterized protein.	0.559
TTAC_LOCUS2243	A0A0R3X9J3	A0A0R3WNB8	A0A0R3X9J3	Uncharacterized protein.	Uncharacterized protein.	0.573
TTAC_LOCUS2243	TTAC_LOCUS9340	A0A0R3WNB8	A0A0R3X741	Uncharacterized protein.	Uncharacterized protein.	0.571
TTAC_LOCUS25	TTAC_LOCUS1194	A0A0R3WHK4	A0A0R3WKF5	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.706
TTAC_LOCUS25	TTAC_LOCUS6927	A0A0R3WHK4	A0A0R3X184	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.842
TTAC_LOCUS25	TTAC_LOCUS9340	A0A0R3WHK4	A0A0R3X741	Uncharacterized protein.	Uncharacterized protein.	0.606
TTAC_LOCUS6927	A0A0R3WVP4	A0A0R3X184	A0A0R3WVP4	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.586
TTAC_LOCUS6927	TTAC_LOCUS25	A0A0R3X184	A0A0R3WHK4	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.842
TTAC_LOCUS6927	TTAC_LOCUS9340	A0A0R3X184	A0A0R3X741	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.802
TTAC_LOCUS7047	TTAC_LOCUS829	A0A0R3X1I0	A0A0R3WJH9	GTP_cyclohydroI domain-containing protein.	DUF1681 domain-containing protein.	0.476