TTAC_LOCUS9536 protein (Hydatigera taeniaeformis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TTAC_LOCUS9536

Uncharacterized protein. (633 aa)

Predicted Functional Partners:

TTAC_LOCUS7523

0.884

TTAC_LOCUS667

0.721

A0A0R3XB14

0.668

A0A0R3X7Y6

0.625

TTAC_LOCUS900

0.495

TTAC_LOCUS5644

0.495

TTAC_LOCUS7136

0.495

TTAC_LOCUS9512

0.495

TTAC_LOCUS751

0.433

TTAC_LOCUS1139

0.433

Your Current Organism:

Hydatigera taeniaeformis

NCBI taxonomy Id: 6205
Other names: Cysticercus fasciolaris, H. taeniaeformis, Hydatigera himalayotaenia, Taenia crassicollis, Taenia taeniaeformis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3X7Y6	TTAC_LOCUS1139	A0A0R3X7Y6	A0A0R3WKA2	SH3 domain-containing protein.	Myosin_tail_1 domain-containing protein.	0.507
A0A0R3X7Y6	TTAC_LOCUS667	A0A0R3X7Y6	A0A0R3WJ40	SH3 domain-containing protein.	Ras-GAP domain-containing protein.	0.922
A0A0R3X7Y6	TTAC_LOCUS751	A0A0R3X7Y6	A0A0R3WJB1	SH3 domain-containing protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.507
A0A0R3X7Y6	TTAC_LOCUS7523	A0A0R3X7Y6	A0A158REL3	SH3 domain-containing protein.	Uncharacterized protein.	0.972
A0A0R3X7Y6	TTAC_LOCUS9536	A0A0R3X7Y6	A0A0R3X7M6	SH3 domain-containing protein.	Uncharacterized protein.	0.625
A0A0R3XB14	TTAC_LOCUS9536	A0A0R3XB14	A0A0R3X7M6	Uncharacterized protein.	Uncharacterized protein.	0.668
TTAC_LOCUS1139	A0A0R3X7Y6	A0A0R3WKA2	A0A0R3X7Y6	Myosin_tail_1 domain-containing protein.	SH3 domain-containing protein.	0.507
TTAC_LOCUS1139	TTAC_LOCUS667	A0A0R3WKA2	A0A0R3WJ40	Myosin_tail_1 domain-containing protein.	Ras-GAP domain-containing protein.	0.650
TTAC_LOCUS1139	TTAC_LOCUS7523	A0A0R3WKA2	A0A158REL3	Myosin_tail_1 domain-containing protein.	Uncharacterized protein.	0.586
TTAC_LOCUS1139	TTAC_LOCUS9536	A0A0R3WKA2	A0A0R3X7M6	Myosin_tail_1 domain-containing protein.	Uncharacterized protein.	0.433
TTAC_LOCUS5644	TTAC_LOCUS667	A0A0R3WY19	A0A0R3WJ40	Uncharacterized protein.	Ras-GAP domain-containing protein.	0.613
TTAC_LOCUS5644	TTAC_LOCUS9536	A0A0R3WY19	A0A0R3X7M6	Uncharacterized protein.	Uncharacterized protein.	0.495
TTAC_LOCUS667	A0A0R3X7Y6	A0A0R3WJ40	A0A0R3X7Y6	Ras-GAP domain-containing protein.	SH3 domain-containing protein.	0.922
TTAC_LOCUS667	TTAC_LOCUS1139	A0A0R3WJ40	A0A0R3WKA2	Ras-GAP domain-containing protein.	Myosin_tail_1 domain-containing protein.	0.650
TTAC_LOCUS667	TTAC_LOCUS5644	A0A0R3WJ40	A0A0R3WY19	Ras-GAP domain-containing protein.	Uncharacterized protein.	0.613
TTAC_LOCUS667	TTAC_LOCUS7136	A0A0R3WJ40	A0A0R3X1P7	Ras-GAP domain-containing protein.	Uncharacterized protein.	0.638
TTAC_LOCUS667	TTAC_LOCUS751	A0A0R3WJ40	A0A0R3WJB1	Ras-GAP domain-containing protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.650
TTAC_LOCUS667	TTAC_LOCUS7523	A0A0R3WJ40	A0A158REL3	Ras-GAP domain-containing protein.	Uncharacterized protein.	0.897
TTAC_LOCUS667	TTAC_LOCUS900	A0A0R3WJ40	A0A0R3WJP1	Ras-GAP domain-containing protein.	Uncharacterized protein.	0.613
TTAC_LOCUS667	TTAC_LOCUS9512	A0A0R3WJ40	A0A0R3X7K2	Ras-GAP domain-containing protein.	Uncharacterized protein.	0.613