Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LSM1 | LSM4 | A0A0R3X2X4 | A0A0R3WQB5 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
LSM1 | TTAC_LOCUS1021 | A0A0R3X2X4 | A0A0R3WJZ5 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.894 |
LSM1 | TTAC_LOCUS1519 | A0A0R3X2X4 | A0A0R3WL94 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.538 |
LSM1 | TTAC_LOCUS3273 | A0A0R3X2X4 | A0A0R3WR98 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | XRN_N domain-containing protein. | 0.965 |
LSM1 | TTAC_LOCUS7610 | A0A0R3X2X4 | A0A0R3X2T8 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | YjeF N-terminal domain-containing protein. | 0.894 |
LSM1 | TTAC_LOCUS8618 | A0A0R3X2X4 | A0A0R3X5A7 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | mRNA_decap_C domain-containing protein. | 0.920 |
LSM1 | TTAC_LOCUS9767 | A0A0R3X2X4 | A0A0R3X8A7 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.919 |
LSM4 | LSM1 | A0A0R3WQB5 | A0A0R3X2X4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.999 |
LSM4 | TTAC_LOCUS1021 | A0A0R3WQB5 | A0A0R3WJZ5 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.912 |
LSM4 | TTAC_LOCUS3273 | A0A0R3WQB5 | A0A0R3WR98 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | XRN_N domain-containing protein. | 0.847 |
LSM4 | TTAC_LOCUS7610 | A0A0R3WQB5 | A0A0R3X2T8 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | YjeF N-terminal domain-containing protein. | 0.918 |
LSM4 | TTAC_LOCUS8618 | A0A0R3WQB5 | A0A0R3X5A7 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | mRNA_decap_C domain-containing protein. | 0.940 |
LSM4 | TTAC_LOCUS9767 | A0A0R3WQB5 | A0A0R3X8A7 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.903 |
TTAC_LOCUS1021 | LSM1 | A0A0R3WJZ5 | A0A0R3X2X4 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.894 |
TTAC_LOCUS1021 | LSM4 | A0A0R3WJZ5 | A0A0R3WQB5 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.912 |
TTAC_LOCUS1021 | TTAC_LOCUS3273 | A0A0R3WJZ5 | A0A0R3WR98 | Uncharacterized protein. | XRN_N domain-containing protein. | 0.730 |
TTAC_LOCUS1021 | TTAC_LOCUS8618 | A0A0R3WJZ5 | A0A0R3X5A7 | Uncharacterized protein. | mRNA_decap_C domain-containing protein. | 0.987 |
TTAC_LOCUS1021 | TTAC_LOCUS9767 | A0A0R3WJZ5 | A0A0R3X8A7 | Uncharacterized protein. | Uncharacterized protein. | 0.959 |
TTAC_LOCUS1123 | TTAC_LOCUS6062 | A0A0R3WK87 | A0A0R3WZ76 | Uncharacterized protein. | NDK domain-containing protein. | 0.906 |
TTAC_LOCUS1123 | TTAC_LOCUS9713 | A0A0R3WK87 | A0A0R3X853 | Uncharacterized protein. | Uncharacterized protein. | 0.573 |
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