STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTAC_LOCUS9767Uncharacterized protein. (470 aa)    
Predicted Functional Partners:
TTAC_LOCUS8618
mRNA_decap_C domain-containing protein.
    
 0.984
TTAC_LOCUS1123
Uncharacterized protein.
  
 0.973
TTAC_LOCUS1021
Uncharacterized protein.
  
 0.959
TTAC_LOCUS7610
YjeF N-terminal domain-containing protein.
  
 0.959
TTAC_LOCUS9713
Uncharacterized protein.
  
 0.929
LSM1
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
    
 0.919
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.903
TTAC_LOCUS6062
NDK domain-containing protein.
  
 
 0.902
TTAC_LOCUS1519
Uncharacterized protein.
    
 
 0.900
TTAC_LOCUS3273
XRN_N domain-containing protein.
   
 0.899
Your Current Organism:
Hydatigera taeniaeformis
NCBI taxonomy Id: 6205
Other names: Cysticercus fasciolaris, H. taeniaeformis, Hydatigera himalayotaenia, Taenia crassicollis, Taenia taeniaeformis
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