STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000001229Sequestosome 1. (453 aa)    
Predicted Functional Partners:
ENSHHUP00000066562
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.997
ENSHHUP00000035440
Uncharacterized protein.
   
 0.980
ENSHHUP00000048600
Ubiquitin B.
   
 0.980
ENSHHUP00000004494
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.976
ENSHHUP00000035130
Uncharacterized protein.
   
 0.976
ENSHHUP00000042574
Microtubule-associated protein 1 light chain 3 beta.
   
 0.976
ENSHHUP00000056199
Microtubule-associated protein 1 light chain 3 beta.
   
 0.976
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.969
ENSHHUP00000037813
GABA(A) receptor-associated protein like 2.
   
 0.969
ENSHHUP00000013374
Uncharacterized protein.
   
 0.968
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.