STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000001239Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
ENSHHUP00000061480
Spastic paraplegia 11.
   
 
 0.960
ENSHHUP00000002521
Uncharacterized protein.
    
 
 0.762
ENSHHUP00000022083
Uncharacterized protein.
    
   0.717
ENSHHUP00000018137
Uncharacterized protein.
    
 
 0.665
ENSHHUP00000020479
Uncharacterized protein.
    
 
 0.665
ENSHHUP00000017896
Uncharacterized protein.
      
 0.572
ENSHHUP00000081393
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
      
 0.572
SPIDR
Scaffold protein involved in DNA repair.
      
 0.544
ENSHHUP00000085364
Uncharacterized protein.
  
     0.535
ENSHHUP00000044197
Ion_trans domain-containing protein.
      
 0.529
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.