STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000001271Tripartite motif containing 107. (516 aa)    
Predicted Functional Partners:
ENSHHUP00000002379
Uncharacterized protein.
    
  0.827
ENSHHUP00000030647
RIG-I_C domain-containing protein.
    
  0.827
ENSHHUP00000074176
RLR CTR domain-containing protein.
    
  0.827
ENSHHUP00000078007
Tripartite motif containing 25.
     
  0.796
ENSHHUP00000087244
Tripartite motif containing 25.
     
  0.796
ENSHHUP00000010698
B30.2/SPRY domain-containing protein.
     
  0.713
ENSHHUP00000011678
Uncharacterized protein.
     
  0.713
ENSHHUP00000030142
Uncharacterized protein.
     
  0.713
ENSHHUP00000031041
Uncharacterized protein.
     
  0.713
ENSHHUP00000040140
Uncharacterized protein.
     
  0.713
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.