STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000001520Si:ch73-238c9.1. (110 aa)    
Predicted Functional Partners:
ENSHHUP00000043576
RAD50 interactor 1.
    
 
 0.898
ENSHHUP00000043750
Uncharacterized protein.
    
 
 0.898
ENSHHUP00000070713
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
   0.854
ZW10
Zw10 kinetochore protein.
    
 
 0.815
ENSHHUP00000074334
Zw10 kinetochore protein.
    
 
 0.815
SCFD2
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.794
ENSHHUP00000016720
Uncharacterized protein.
    
 
 0.794
SCFD2-2
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.794
ENSHHUP00000043496
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.770
ENSHHUP00000046489
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.770
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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