STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATL1Atlastin GTPase 1. (489 aa)    
Predicted Functional Partners:
ENSHHUP00000006972
Reticulon.
    
 
 0.723
ENSHHUP00000070781
Reticulon.
    
 
 0.723
ENSHHUP00000086318
Receptor expression-enhancing protein.
    
 
 0.721
ENSHHUP00000089053
Receptor expression-enhancing protein.
    
 
 0.721
RTN1
Reticulon.
    
 
 0.685
ENSHHUP00000089224
Reticulon.
    
 
 0.685
ENSHHUP00000005574
NIPA magnesium transporter 1.
      
 0.684
ENSHHUP00000006406
Reticulon.
    
 
 0.673
ENSHHUP00000007255
Reticulon.
    
 
 0.673
ENSHHUP00000024326
Reticulon.
    
 
 0.673
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.