ENSHHUP00000001563 protein (Hucho hucho) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSHHUP00000001563

AAA_12 domain-containing protein. (163 aa)

Predicted Functional Partners:

ENSHHUP00000031912

0.850

ENSHHUP00000038260

0.850

ENSHHUP00000020983

0.831

ENSHHUP00000072143

0.831

ENSHHUP00000038016

0.780

ENSHHUP00000072445

0.780

ENSHHUP00000046681

0.769

ENSHHUP00000065849

0.754

ENSHHUP00000083400

0.754

ENSHHUP00000074162

0.742

Your Current Organism:

Hucho hucho

NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSHHUP00000001563	ENSHHUP00000020983	AAA_12 domain-containing protein.	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	0.831
ENSHHUP00000001563	ENSHHUP00000031912	AAA_12 domain-containing protein.	Piwi domain-containing protein.	0.850
ENSHHUP00000001563	ENSHHUP00000038016	AAA_12 domain-containing protein.	Phospholipase D family, member 6.	0.780
ENSHHUP00000001563	ENSHHUP00000038260	AAA_12 domain-containing protein.	Uncharacterized protein; Belongs to the argonaute family.	0.850
ENSHHUP00000001563	ENSHHUP00000046681	AAA_12 domain-containing protein.	Tudor domain containing 12.	0.769
ENSHHUP00000001563	ENSHHUP00000065849	AAA_12 domain-containing protein.	Ankyrin repeat, SAM and basic leucine zipper domain containing 1.	0.754
ENSHHUP00000001563	ENSHHUP00000072143	AAA_12 domain-containing protein.	GAGE domain-containing protein.	0.831
ENSHHUP00000001563	ENSHHUP00000072445	AAA_12 domain-containing protein.	PLDc_2 domain-containing protein.	0.780
ENSHHUP00000001563	ENSHHUP00000074162	AAA_12 domain-containing protein.	Uncharacterized protein.	0.742
ENSHHUP00000001563	ENSHHUP00000083400	AAA_12 domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.754
ENSHHUP00000020983	ENSHHUP00000001563	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	AAA_12 domain-containing protein.	0.831
ENSHHUP00000020983	ENSHHUP00000031912	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	Piwi domain-containing protein.	0.436
ENSHHUP00000020983	ENSHHUP00000038016	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	Phospholipase D family, member 6.	0.626
ENSHHUP00000020983	ENSHHUP00000038260	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the argonaute family.	0.436
ENSHHUP00000020983	ENSHHUP00000046681	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	Tudor domain containing 12.	0.805
ENSHHUP00000020983	ENSHHUP00000065849	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	Ankyrin repeat, SAM and basic leucine zipper domain containing 1.	0.733
ENSHHUP00000020983	ENSHHUP00000072445	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	PLDc_2 domain-containing protein.	0.626
ENSHHUP00000020983	ENSHHUP00000074162	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	Uncharacterized protein.	0.892
ENSHHUP00000020983	ENSHHUP00000083400	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.	ANK_REP_REGION domain-containing protein.	0.733
ENSHHUP00000031912	ENSHHUP00000001563	Piwi domain-containing protein.	AAA_12 domain-containing protein.	0.850