STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000001873Ubiquitin carboxyl-terminal hydrolase. (800 aa)    
Predicted Functional Partners:
ENSHHUP00000018057
Excision repair cross-complementation group 1.
    
 0.907
ENSHHUP00000033391
Ubiquitin carboxyl-terminal hydrolase.
     
  0.875
ENSHHUP00000035440
Uncharacterized protein.
    
  0.848
ENSHHUP00000048600
Ubiquitin B.
    
  0.848
ENSHHUP00000026737
Zinc finger, RAN-binding domain containing 1b.
    
 
 0.726
ENSHHUP00000059635
Uncharacterized protein.
    
 
 0.726
ZRANB1
Zinc finger RANBP2-type containing 1.
    
 
 0.726
ENSHHUP00000024268
OTU domain-containing protein.
      
 0.707
ENSHHUP00000062335
Kelch-like family member 7.
      
 0.679
ENSHHUP00000007522
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.668
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.