STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000004100Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. (1175 aa)    
Predicted Functional Partners:
ENSHHUP00000066562
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.905
ENSHHUP00000041549
Uncharacterized protein.
   
 
 0.890
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.890
ENSHHUP00000078360
Thyroid hormone receptor interactor 12.
   
 
 0.890
ENSHHUP00000035440
Uncharacterized protein.
    
 0.815
ENSHHUP00000048600
Ubiquitin B.
    
 0.815
ENSHHUP00000028921
Ubiquitin-like domain-containing protein.
    
 0.808
ENSHHUP00000074872
Ribosomal protein S27a.
    
 0.808
ENSHHUP00000017343
Claspin.
    
 0.802
CLSPN
Claspin.
    
 0.802
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.