STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000004516SERPINE1 mRNA binding protein 1b. (421 aa)    
Predicted Functional Partners:
RPS20
Ribosomal protein S20.
   
   0.991
ENSHHUP00000007522
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.991
ENSHHUP00000042346
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.991
ENSHHUP00000045789
Ubiquitin-like domain-containing protein.
   
   0.991
ENSHHUP00000045823
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.991
ENSHHUP00000081740
Uncharacterized protein.
   
   0.991
ENSHHUP00000019095
Receptor for activated C kinase 1.
   
 
 0.980
ENSHHUP00000028948
Receptor for activated C kinase 1.
   
 
 0.980
ENSHHUP00000042782
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.980
ENSHHUP00000089932
Ribosomal protein L15.
   
   0.980
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.