STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000007635Heterogeneous nuclear ribonucleoprotein D-like. (301 aa)    
Predicted Functional Partners:
ENSHHUP00000087787
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
  
 
 0.847
ENSHHUP00000007522
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.810
ENSHHUP00000042346
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.810
ENSHHUP00000045789
Ubiquitin-like domain-containing protein.
   
  0.810
ENSHHUP00000045823
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.810
ENSHHUP00000081740
Uncharacterized protein.
   
  0.810
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.807
ENSHHUP00000047018
Heterogeneous nuclear ribonucleoprotein M.
   
 0.807
ENSHHUP00000013698
Serine/arginine-rich splicing factor 2b.
  
 0.799
ENSHHUP00000001172
Serine/arginine-rich splicing factor 2a.
  
 0.798
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.