STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000008880GTP_EFTU_D2 domain-containing protein. (549 aa)    
Predicted Functional Partners:
ENSHHUP00000042709
Glycoprotein IX (platelet).
      
 0.522
ENSHHUP00000052988
Methionyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.507
ENSHHUP00000003359
Eukaryotic translation initiation factor 2, subunit 3 gamma.
    
 
 0.483
ENSHHUP00000045096
Tr-type G domain-containing protein.
    
 
 0.483
ENSHHUP00000064198
NudC domain containing 3.
      
 0.478
ENSHHUP00000090134
NudC domain containing 3.
      
 0.478
ENSHHUP00000034181
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.455
ENSHHUP00000020967
Ubiquitin family domain containing 1.
      
 0.438
ENSHHUP00000048670
Ubiquitin family domain containing 1.
      
 0.438
ENSHHUP00000006918
Uncharacterized protein.
      
 0.432
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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