STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC1Transmembrane channel-like protein. (879 aa)    
Predicted Functional Partners:
ENSHHUP00000020086
Uncharacterized protein.
    
 0.974
ENSHHUP00000021643
Calcium and integrin binding family member 3.
    
 0.974
CIB2
Calcium and integrin binding family member 2.
    
 0.966
ENSHHUP00000034232
LHFPL tetraspan subfamily member 5a.
   
 
 0.679
ENSHHUP00000054640
Uncharacterized protein.
   
 
 0.679
ENSHHUP00000070469
LHFPL tetraspan subfamily member 5b.
   
 
 0.679
ENSHHUP00000085802
Transmembrane inner ear.
     
 0.677
ENSHHUP00000014243
Si:ch73-335l21.4.
   
  0.634
ENSHHUP00000069524
SMC5-SMC6 complex localization factor 1.
   
  0.622
ENSHHUP00000053334
Uncharacterized protein.
    
  0.619
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.