STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000012488Homeobox A4. (253 aa)    
Predicted Functional Partners:
ENSHHUP00000004588
Homeobox C6a.
   
 
0.856
ENSHHUP00000016623
Homeobox C6b.
   
 
0.856
ENSHHUP00000064692
Homeobox C6b.
   
 
0.856
ENSHHUP00000004542
Homeobox C5a.
  
  
0.847
ENSHHUP00000016628
Homeobox domain-containing protein.
   
  
0.842
ENSHHUP00000043443
Homeobox C5a.
   
  
0.842
ENSHHUP00000064685
Homeobox domain-containing protein.
   
  
0.842
ENSHHUP00000041177
Homeobox domain-containing protein.
  
 
0.790
ENSHHUP00000056258
Homeobox D4a.
  
 
0.790
ENSHHUP00000002205
Homeobox B6b.
   
 
0.774
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.