STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000012856Uncharacterized protein. (350 aa)    
Predicted Functional Partners:
LAMP1
Lysosomal associated membrane protein 1.
     
0.868
ENSHHUP00000053267
Uncharacterized protein.
   
 
0.853
ENSHHUP00000080817
Uncharacterized protein.
   
 
0.853
ENSHHUP00000038504
Lysosomal associated membrane protein 1.
     
0.847
ENSHHUP00000070627
Lysosomal associated membrane protein 1.
     
0.847
ENSHHUP00000007409
DEP domain containing 5.
    
 
 0.774
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.754
ENSHHUP00000064764
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 
 0.754
ENSHHUP00000083292
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 
 0.754
ENSHHUP00000086380
NPR2 like, GATOR1 complex subunit.
    
 
 0.754
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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