STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB20RAB20, member RAS oncogene family. (289 aa)    
Predicted Functional Partners:
ENSHHUP00000034215
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.978
ENSHHUP00000042906
Uncharacterized protein.
   
 0.978
ENSHHUP00000054838
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.978
ENSHHUP00000075041
Uncharacterized protein.
   
 0.978
ENSHHUP00000090598
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.978
ENSHHUP00000042366
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.924
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
 0.924
ENSHHUP00000051874
Uncharacterized protein.
    
 
 0.924
ENSHHUP00000070016
Uncharacterized protein.
    
 
 0.924
ENSHHUP00000087152
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.924
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.