STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000018567Homeobox protein. (316 aa)    
Predicted Functional Partners:
LRTM2
Leucine rich repeats and transmembrane domains 2.
    
 
 0.582
ENSHHUP00000033356
Sorting nexin 16.
      
 0.563
ENSHHUP00000033112
Uncharacterized protein.
    
 
 0.558
CTNNB1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.558
ENSHHUP00000035850
Uncharacterized protein.
      
 0.539
ENSHHUP00000063344
Uncharacterized protein.
      
 0.539
ENSHHUP00000030905
Uncharacterized protein.
      
 0.524
ENSHHUP00000060190
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.524
ENSHHUP00000039161
Acetyl-CoA carboxylase beta.
      
 0.523
ENSHHUP00000074265
Acetyl-CoA carboxylase beta.
      
 0.523
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.