STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000018901Vacuolar protein sorting 13 homolog A (S. cerevisiae). (2420 aa)    
Predicted Functional Partners:
ENSHHUP00000032099
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.521
ENSHHUP00000037312
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.521
ENSHHUP00000018427
Uncharacterized protein.
    
   0.485
ENSHHUP00000086762
Uncharacterized protein.
    
   0.485
ENSHHUP00000015415
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 
 0.483
ENSHHUP00000000629
Protein kinase domain-containing protein.
    
 
 0.451
ENSHHUP00000000651
Uncharacterized protein.
    
 
 0.451
ENSHHUP00000089449
Cyclin G associated kinase.
    
 
 0.451
ENSHHUP00000001875
IPPc domain-containing protein.
    
 
 0.421
ENSHHUP00000001885
DUF1866 domain-containing protein.
    
 
 0.421
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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