STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCC3Transmembrane and coiled-coil domain family 3. (542 aa)    
Predicted Functional Partners:
ENSHHUP00000000888
Transmembrane and tetratricopeptide repeat containing 4.
      
 0.522
ENSHHUP00000043902
Coiled-coil domain containing 106b.
      
 0.436
ENSHHUP00000009816
Uncharacterized protein.
  
 
 
0.416
ENSHHUP00000081883
Uncharacterized protein.
  
 
 
0.414
ENSHHUP00000021257
Uncharacterized protein.
  
 
 
0.413
TMCC1-2
Transmembrane and coiled-coil domain family 1.
  
 
 
0.411
ENSHHUP00000080027
Transmembrane and coiled-coil domain family 1b.
  
 
 
0.410
TMCC1
Transmembrane and coiled-coil domain family 1.
  
 
 
0.409
ENSHHUP00000012749
Transmembrane and coiled-coil domain family 2.
  
 
 
0.406
ENSHHUP00000086024
Transmembrane and coiled-coil domain family 2.
  
 
 
0.406
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.