STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000030865Chromo domain-containing protein. (92 aa)    
Predicted Functional Partners:
ENSHHUP00000049561
Helicase ATP-binding domain-containing protein.
   
 0.833
ENSHHUP00000076424
Helicase C-terminal domain-containing protein.
   
 0.833
ENSHHUP00000026163
Uncharacterized protein.
   
 0.795
ENSHHUP00000039562
Tudor-knot domain-containing protein.
   
 0.795
ENSHHUP00000079170
Uncharacterized protein.
   
 0.795
ENSHHUP00000044627
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.792
ENSHHUP00000081290
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.792
ENSHHUP00000064719
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.791
ENSHHUP00000032168
Uncharacterized protein.
   
 0.789
ENSHHUP00000032174
Tudor-knot domain-containing protein.
   
 0.789
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.