STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000034115Homeobox A13b. (295 aa)    
Predicted Functional Partners:
ENSHHUP00000031404
Transcription factor SOX.
    
 
 0.578
ENSHHUP00000007671
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
  
 0.575
ENSHHUP00000033444
Uncharacterized protein.
  
 
 
 0.566
ENSHHUP00000049501
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.563
ENSHHUP00000072725
Angiopoietin-like 2b.
      
 0.563
ENSHHUP00000018596
Transcription factor AP-2 alpha.
   
 
 0.527
ENSHHUP00000049299
Transcription factor AP-2 alpha.
   
 
 0.527
ENSHHUP00000000799
Pre-B-cell leukemia transcription factor 4.
    
 
 0.526
ENSHHUP00000010829
PBC domain-containing protein.
    
 
 0.526
ENSHHUP00000013550
Pre-B-cell leukemia homeobox 1a.
    
 
 0.526
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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