STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000042788Rab_eff_C domain-containing protein. (211 aa)    
Predicted Functional Partners:
ENSHHUP00000033235
Uncharacterized protein.
    
 
 0.853
ENSHHUP00000034738
RAB27A, member RAS oncogene family.
    
 
 0.853
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.853
ENSHHUP00000059334
Uncharacterized protein.
    
 
 0.853
ENSHHUP00000065626
RAB27A, member RAS oncogene family.
    
 
 0.853
ENSHHUP00000079313
Uncharacterized protein.
    
 
 0.853
ENSHHUP00000049780
Rab interacting lysosomal protein-like 2.
    
 
 0.773
ENSHHUP00000091706
Rab interacting lysosomal protein-like 2.
    
 
 0.773
ENSHHUP00000005612
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.698
ENSHHUP00000005663
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.698
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.