STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000047557Transmembrane protein 259. (389 aa)    
Predicted Functional Partners:
ENSHHUP00000075919
Transmembrane and ubiquitin-like domain containing 1.
    
 
 0.628
ENSHHUP00000043921
RING-type domain-containing protein.
    
 
 0.540
ENSHHUP00000045553
RING-type domain-containing protein.
    
 
 0.540
RNF5
Ring finger protein 5.
    
 
 0.540
ENSHHUP00000072069
Uncharacterized protein.
    
 
 0.540
ENSHHUP00000069046
Transmembrane and ubiquitin-like domain containing 2.
    
 
 0.507
ENSHHUP00000081526
Transmembrane and ubiquitin-like domain containing 2.
    
 
 0.507
ENSHHUP00000025281
Sphingomyelin phosphodiesterase, acid-like 3B.
      
 0.505
ENSHHUP00000066066
Acid sphingomyelinase-like phosphodiesterase.
      
 0.505
ENSHHUP00000004782
STT3A, subunit of the oligosaccharyltransferase complex (catalytic).
      
 0.491
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.