STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP000000480124F5 domain-containing protein. (65 aa)    
Predicted Functional Partners:
ENSHHUP00000089047
Uncharacterized protein.
   
    0.673
ENSHHUP00000030006
Small nuclear ribonucleoprotein 200 (U5).
    
   0.542
ENSHHUP00000032873
Small nuclear ribonucleoprotein 200 (U5).
    
   0.542
ENSHHUP00000037445
Carnitine deficiency-associated gene expressed in ventricle 3.
      
 0.539
ENSHHUP00000070929
Ribonuclease P/MRP 40 subunit.
      
 0.507
ENSHHUP00000068893
Zinc finger, FYVE domain containing 19.
      
 0.493
ENSHHUP00000050983
Carnitine deficiency-associated gene expressed in ventricle 3.
      
 0.481
ENSHHUP00000000077
Pdgfa associated protein 1a.
      
 0.480
ENSHHUP00000020020
Pdgfa associated protein 1a.
      
 0.480
ENSHHUP00000026547
Pre-mRNA processing factor 8.
    
   0.479
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.