STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000053350Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
ENSHHUP00000016493
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.981
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.981
ENSHHUP00000042523
Splicing factor 3a, subunit 3.
   
 0.978
ENSHHUP00000090047
Splicing factor 3a, subunit 3.
   
 0.978
ENSHHUP00000038465
Small nuclear ribonucleoprotein G.
   
 0.974
ENSHHUP00000070775
Small nuclear ribonucleoprotein G.
   
 0.974
ENSHHUP00000041995
Splicing factor 3b, subunit 1.
   
 0.971
ENSHHUP00000089408
Splicing factor 3b, subunit 1.
   
 0.971
ENSHHUP00000032516
Splicing factor 3a subunit 1.
   
 0.970
ENSHHUP00000060975
Splicing factor 3a, subunit 1.
   
 0.970
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.