STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000054238Mitochondrial E3 ubiquitin protein ligase 1b. (377 aa)    
Predicted Functional Partners:
ENSHHUP00000008084
Transmembrane protein 115.
   
    0.860
ENSHHUP00000062805
Transmembrane protein 115.
   
    0.860
ENSHHUP00000033420
Ubiquitin carboxyl-terminal hydrolase.
     
 0.844
ENSHHUP00000056589
UBX domain protein 7.
    
  0.815
ENSHHUP00000077157
UBX domain protein 7.
    
  0.815
ENSHHUP00000011838
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.745
ENSHHUP00000014006
Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.745
ENSHHUP00000023563
Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.745
ENSHHUP00000027324
Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.745
ENSHHUP00000041256
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.745
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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