STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000054920WD repeat domain 75. (848 aa)    
Predicted Functional Partners:
ENSHHUP00000009669
WD_REPEATS_REGION domain-containing protein.
   
 0.999
ENSHHUP00000013126
Transducin (beta)-like 3.
   
 0.999
ENSHHUP00000013813
UTP6, small subunit (SSU) processome component, homolog (yeast).
   
 0.999
ENSHHUP00000016906
Transducin (beta)-like 3.
   
 0.999
ENSHHUP00000019094
Programmed cell death 11.
   
 0.999
ENSHHUP00000020251
UTP20 small subunit (SSU) processome component.
   
 0.999
ENSHHUP00000020858
NOP5NT domain-containing protein.
   
 0.999
ENSHHUP00000022297
WD repeat domain 43.
   
 0.999
ENSHHUP00000022358
NOP56 ribonucleoprotein homolog.
   
 0.999
ENSHHUP00000023638
BMS1 ribosome biogenesis factor.
   
 0.999
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.