STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000059197Helicase ATP-binding domain-containing protein. (213 aa)    
Predicted Functional Partners:
ENSHHUP00000017896
Uncharacterized protein.
   
 0.989
ENSHHUP00000081393
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 0.989
ENSHHUP00000026547
Pre-mRNA processing factor 8.
   
 0.988
ENSHHUP00000052505
Pre-mRNA processing factor 8.
   
 0.988
ENSHHUP00000055192
Elongation factor Tu GTP binding domain containing 2.
  
 0.987
ENSHHUP00000079701
Tr-type G domain-containing protein.
  
 0.987
ENSHHUP00000030006
Small nuclear ribonucleoprotein 200 (U5).
  
 0.986
ENSHHUP00000032873
Small nuclear ribonucleoprotein 200 (U5).
  
 0.986
ENSHHUP00000016493
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.982
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.982
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.