ENSHHUP00000061665 protein (Hucho hucho) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSHHUP00000061665

Uncharacterized protein. (54 aa)

Predicted Functional Partners:

ENSHHUP00000032029

0.821

ENSHHUP00000083529

0.821

ENSHHUP00000090880

0.821

ENSHHUP00000091396

0.821

ENSHHUP00000056898

0.776

ENSHHUP00000077318

0.738

ENSHHUP00000086080

0.738

ENSHHUP00000019548

0.730

ENSHHUP00000014035

0.722

ENSHHUP00000015118

0.718

Your Current Organism:

Hucho hucho

NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSHHUP00000014035	ENSHHUP00000015118	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Protein kinase domain-containing protein.	0.724
ENSHHUP00000014035	ENSHHUP00000019548	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	General transcription factor IIH, polypeptide 5.	0.866
ENSHHUP00000014035	ENSHHUP00000032029	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA box binding protein like 2.	0.888
ENSHHUP00000014035	ENSHHUP00000061665	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.722
ENSHHUP00000014035	ENSHHUP00000077318	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RRN3 homolog, RNA polymerase I transcription factor.	0.999
ENSHHUP00000014035	ENSHHUP00000083529	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA box binding protein like 2.	0.888
ENSHHUP00000014035	ENSHHUP00000086080	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
ENSHHUP00000014035	ENSHHUP00000090880	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA-box binding protein.	0.888
ENSHHUP00000014035	ENSHHUP00000091396	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA box binding protein.	0.888
ENSHHUP00000015118	ENSHHUP00000014035	Protein kinase domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.724
ENSHHUP00000015118	ENSHHUP00000019548	Protein kinase domain-containing protein.	General transcription factor IIH, polypeptide 5.	0.985
ENSHHUP00000015118	ENSHHUP00000032029	Protein kinase domain-containing protein.	TATA box binding protein like 2.	0.891
ENSHHUP00000015118	ENSHHUP00000061665	Protein kinase domain-containing protein.	Uncharacterized protein.	0.718
ENSHHUP00000015118	ENSHHUP00000083529	Protein kinase domain-containing protein.	TATA box binding protein like 2.	0.891
ENSHHUP00000015118	ENSHHUP00000090880	Protein kinase domain-containing protein.	TATA-box binding protein.	0.891
ENSHHUP00000015118	ENSHHUP00000091396	Protein kinase domain-containing protein.	TATA box binding protein.	0.891
ENSHHUP00000019548	ENSHHUP00000014035	General transcription factor IIH, polypeptide 5.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.866
ENSHHUP00000019548	ENSHHUP00000015118	General transcription factor IIH, polypeptide 5.	Protein kinase domain-containing protein.	0.985
ENSHHUP00000019548	ENSHHUP00000032029	General transcription factor IIH, polypeptide 5.	TATA box binding protein like 2.	0.933
ENSHHUP00000019548	ENSHHUP00000061665	General transcription factor IIH, polypeptide 5.	Uncharacterized protein.	0.730