STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000079509Uncharacterized protein. (534 aa)    
Predicted Functional Partners:
ENSHHUP00000037967
Cleavage and polyadenylation specific factor 3.
   
 0.986
ENSHHUP00000003815
Symplekin.
   
 0.980
ENSHHUP00000021317
CSTF1_dimer domain-containing protein.
   
 0.977
ENSHHUP00000014494
FIP1 like 1a (S. cerevisiae).
    
 0.948
ENSHHUP00000054489
Cleavage and polyadenylation specific factor 1.
   
 0.948
ENSHHUP00000056367
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.948
ENSHHUP00000062731
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.948
ENSHHUP00000071298
Cleavage and polyadenylation specific factor 1.
   
 0.948
ENSHHUP00000075371
Fip1 domain-containing protein.
    
 0.948
ENSHHUP00000040100
PCF11, cleavage and polyadenylation factor subunit.
   
 0.943
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.