STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHHUP00000087289Reverse transcriptase domain-containing protein. (376 aa)    
Predicted Functional Partners:
ENSHHUP00000007522
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.769
ENSHHUP00000042346
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.769
ENSHHUP00000045789
Ubiquitin-like domain-containing protein.
    
  0.769
ENSHHUP00000045823
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.769
ENSHHUP00000081740
Uncharacterized protein.
    
  0.769
ENSHHUP00000090678
Recombination activating gene 2.
   
 0.742
ENSHHUP00000087940
BRISC and BRCA1 A complex member 1.
    
 0.699
ENSHHUP00000019067
Si:ch211-152c8.4; Belongs to the complex I LYR family.
    
 0.681
ENSHHUP00000070910
LYR motif containing 4; Belongs to the complex I LYR family.
    
 0.681
ENSHHUP00000006583
Uncharacterized protein.
    
 0.666
Your Current Organism:
Hucho hucho
NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen
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