Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSHHUP00000000401 | ENSHHUP00000004972 | DNA polymerase. | Polymerase (DNA-directed), delta 3, accessory subunit. | 0.990 |
ENSHHUP00000000401 | ENSHHUP00000017210 | DNA polymerase. | DNA_pol_B domain-containing protein. | 0.803 |
ENSHHUP00000000401 | ENSHHUP00000020104 | DNA polymerase. | Mitotic arrest deficient 2 like 2. | 0.984 |
ENSHHUP00000000401 | ENSHHUP00000023093 | DNA polymerase. | DNA polymerase. | 0.983 |
ENSHHUP00000000401 | ENSHHUP00000031810 | DNA polymerase. | Si:dkey-28b4.7. | 0.992 |
ENSHHUP00000000401 | ENSHHUP00000082369 | DNA polymerase. | Uncharacterized protein. | 0.990 |
ENSHHUP00000000401 | ENSHHUP00000088389 | DNA polymerase. | Polymerase (DNA directed), delta 2, regulatory subunit. | 0.998 |
ENSHHUP00000000401 | ENSHHUP00000090268 | DNA polymerase. | DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. | 0.991 |
ENSHHUP00000004972 | ENSHHUP00000000401 | Polymerase (DNA-directed), delta 3, accessory subunit. | DNA polymerase. | 0.990 |
ENSHHUP00000004972 | ENSHHUP00000010687 | Polymerase (DNA-directed), delta 3, accessory subunit. | zf-C4pol domain-containing protein. | 0.990 |
ENSHHUP00000004972 | ENSHHUP00000017210 | Polymerase (DNA-directed), delta 3, accessory subunit. | DNA_pol_B domain-containing protein. | 0.852 |
ENSHHUP00000004972 | ENSHHUP00000020104 | Polymerase (DNA-directed), delta 3, accessory subunit. | Mitotic arrest deficient 2 like 2. | 0.748 |
ENSHHUP00000004972 | ENSHHUP00000023093 | Polymerase (DNA-directed), delta 3, accessory subunit. | DNA polymerase. | 0.953 |
ENSHHUP00000004972 | ENSHHUP00000028210 | Polymerase (DNA-directed), delta 3, accessory subunit. | DNA polymerase. | 0.990 |
ENSHHUP00000004972 | ENSHHUP00000031810 | Polymerase (DNA-directed), delta 3, accessory subunit. | Si:dkey-28b4.7. | 0.994 |
ENSHHUP00000004972 | ENSHHUP00000088389 | Polymerase (DNA-directed), delta 3, accessory subunit. | Polymerase (DNA directed), delta 2, regulatory subunit. | 0.999 |
ENSHHUP00000004972 | ENSHHUP00000090268 | Polymerase (DNA-directed), delta 3, accessory subunit. | DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. | 0.755 |
ENSHHUP00000010687 | ENSHHUP00000004972 | zf-C4pol domain-containing protein. | Polymerase (DNA-directed), delta 3, accessory subunit. | 0.990 |
ENSHHUP00000010687 | ENSHHUP00000017210 | zf-C4pol domain-containing protein. | DNA_pol_B domain-containing protein. | 0.803 |
ENSHHUP00000010687 | ENSHHUP00000020104 | zf-C4pol domain-containing protein. | Mitotic arrest deficient 2 like 2. | 0.984 |
page 1 of 5