STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255455_00415Unannotated protein. (110 aa)    
Predicted Functional Partners:
GCA_000255455_01334
Unannotated protein.
   
  
 0.808
GCA_000255455_03556
Unannotated protein.
  
     0.774
GCA_000255455_00416
Unannotated protein.
       0.773
GCA_000255455_01613
Unannotated protein.
    
 0.704
GCA_000255455_00414
Unannotated protein.
 
    0.691
GCA_000255455_00410
Unannotated protein.
 
     0.578
GCA_000255455_00413
Unannotated protein.
       0.575
GCA_000255455_00412
Unannotated protein.
       0.534
GCA_000255455_00487
Unannotated protein.
  
 
  0.518
GCA_000255455_00411
Unannotated protein.
       0.505
Your Current Organism:
Aquimarina agarilytica
NCBI taxonomy Id: 620914
Other names: A. agarilytica ZC1, Aquimarina agarilytica ZC1, Aquimarina agarilytica str. ZC1, Aquimarina agarilytica strain ZC1, Flavobacteriaceae bacterium ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.