STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255455_00428Unannotated protein. (105 aa)    
Predicted Functional Partners:
GCA_000255455_02578
Unannotated protein.
 
 0.972
GCA_000255455_00357
Unannotated protein.
   
  0.601
GCA_000255455_02267
Unannotated protein.
   
  0.601
GCA_000255455_02648
Unannotated protein.
    
   0.540
GCA_000255455_01613
Unannotated protein.
    
  0.502
GCA_000255455_00427
Unannotated protein.
  
    0.487
GCA_000255455_02495
Unannotated protein.
    
 
 0.473
GCA_000255455_01182
Unannotated protein.
  
 
 0.455
GCA_000255455_00429
Unannotated protein.
       0.447
GCA_000255455_02418
Unannotated protein.
   
 
 0.430
Your Current Organism:
Aquimarina agarilytica
NCBI taxonomy Id: 620914
Other names: A. agarilytica ZC1, Aquimarina agarilytica ZC1, Aquimarina agarilytica str. ZC1, Aquimarina agarilytica strain ZC1, Flavobacteriaceae bacterium ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.