STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255455_00697Unannotated protein. (139 aa)    
Predicted Functional Partners:
GCA_000255455_00699
Unannotated protein.
 
     0.881
GCA_000255455_00698
Unannotated protein.
 
     0.820
GCA_000255455_00708
Unannotated protein.
 
     0.776
GCA_000255455_01406
Unannotated protein.
  
     0.605
GCA_000255455_00703
Unannotated protein.
 
     0.574
GCA_000255455_02606
Unannotated protein.
  
     0.571
GCA_000255455_00701
Unannotated protein.
 
     0.554
GCA_000255455_02780
Unannotated protein.
  
     0.541
GCA_000255455_00499
Unannotated protein.
  
     0.522
GCA_000255455_00711
Unannotated protein.
  
     0.507
Your Current Organism:
Aquimarina agarilytica
NCBI taxonomy Id: 620914
Other names: A. agarilytica ZC1, Aquimarina agarilytica ZC1, Aquimarina agarilytica str. ZC1, Aquimarina agarilytica strain ZC1, Flavobacteriaceae bacterium ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.