STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255455_01612Unannotated protein. (453 aa)    
Predicted Functional Partners:
GCA_000255455_00007
Unannotated protein.
 
 
 0.981
GCA_000255455_02834
Unannotated protein.
  
 
  0.948
GCA_000255455_02490
Unannotated protein.
 
 
 0.765
GCA_000255455_02458
Unannotated protein.
  
  
 0.734
GCA_000255455_00008
Unannotated protein.
  
     0.728
GCA_000255455_01613
Unannotated protein.
 
   
 0.724
GCA_000255455_01611
Unannotated protein.
 
     0.722
GCA_000255455_00597
Unannotated protein.
     
 0.656
GCA_000255455_03438
Unannotated protein.
  
  
  0.655
GCA_000255455_00592
Unannotated protein.
    
  0.648
Your Current Organism:
Aquimarina agarilytica
NCBI taxonomy Id: 620914
Other names: A. agarilytica ZC1, Aquimarina agarilytica ZC1, Aquimarina agarilytica str. ZC1, Aquimarina agarilytica strain ZC1, Flavobacteriaceae bacterium ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.