STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255455_03149Unannotated protein. (143 aa)    
Predicted Functional Partners:
GCA_000255455_00378
Unannotated protein.
    
  0.703
GCA_000255455_03146
Unannotated protein.
       0.673
GCA_000255455_03147
Unannotated protein.
       0.673
GCA_000255455_03148
Unannotated protein.
       0.668
GCA_000255455_03145
Unannotated protein.
       0.617
GCA_000255455_01934
Unannotated protein.
    
 0.511
GCA_000255455_01461
Unannotated protein.
    
 0.456
GCA_000255455_01853
Unannotated protein.
  
 
 0.436
GCA_000255455_02820
Unannotated protein.
    
  0.416
GCA_000255455_02892
Unannotated protein.
  
 
 0.413
Your Current Organism:
Aquimarina agarilytica
NCBI taxonomy Id: 620914
Other names: A. agarilytica ZC1, Aquimarina agarilytica ZC1, Aquimarina agarilytica str. ZC1, Aquimarina agarilytica strain ZC1, Flavobacteriaceae bacterium ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.