STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00312DNA polymerase epsilon subunit 4. (160 aa)    
Predicted Functional Partners:
EGR_08888
DNA polymerase epsilon subunit 3.
    
 0.999
EGR_08768
DNA polymerase epsilon subunit 2.
    
 0.999
EGR_07816
DNA polymerase epsilon catalytic subunit A.
    
 0.999
EGR_01072
DNA polymerase alpha catalytic subunit.
    
 0.914
EGR_00247
CDC45-related protein.
    
 0.861
EGR_00175
DNA polymerase.
    
 0.852
EGR_01877
DNA polymerase alpha subunit B.
     
 0.824
EGR_06987
DNA polymerase.
    
 0.822
EGR_07321
DNA polymerase delta subunit 2.
     
 0.805
EGR_01173
DNA primase large subunit.
     
 0.789
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.