STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_01550Thioredoxin-related transmembrane protein. (264 aa)    
Predicted Functional Partners:
EGR_06840
Peptide methionine sulfoxide reductase msrA.
   
 0.670
TPx
Thioredoxin peroxidase.
  
 0.664
EGR_10291
Thioredoxin-dependent peroxide reductase.
  
 0.664
EGR_00210
Peroxiredoxin.
  
 0.664
EGR_06088
Ero1-like protein.
   
 0.652
EGR_01749
Thioredoxin reductase 3.
  
 0.652
EGR_01706
Dihydrolipoyl dehydrogenase.
  
 0.652
EGR_08045
Thioredoxin-like protein.
    
 0.632
EGR_06707
Calnexin.
   
 0.614
EGR_00384
Thioredoxin-related transmembrane protein.
    
 
 0.586
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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