STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_02121Rhabdoid tumor deletion region protein. (369 aa)    
Predicted Functional Partners:
EGR_02783
WD repeat-containing protein.
   
 
 0.790
EGR_03263
Coiled-coil domain-containing protein 65.
   
 
 0.671
EGR_07915
Protein FAM154A.
   
 
 0.636
EGR_00456
Deleted in lung and esophageal cancer protein.
    
 
 0.636
EGR_07002
WD repeat-containing protein 5.
   
 
 0.610
EGR_08362
WD repeat and SOCS box-containing protein.
   
 
 0.610
EGR_05200
WD repeat-containing protein 51A.
   
 
 0.610
EGR_07172
Translin-associated factor X-interacting protein.
   
  
 0.587
EGR_06773
Leucine-rich repeat-containing protein.
   
 
 0.555
EGR_01363
Protein MAK16 homolog; Belongs to the MAK16 family.
      
 0.535
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.