STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00792PRKR interacting protein 1. (180 aa)    
Predicted Functional Partners:
EGR_04826
Pre mRNA processing factor 17.
    
 0.950
EGR_06067
Pre-mRNA-splicing factor SLU7.
   
 0.940
EGR_09150
Uncharacterized protein.
    
 0.919
EGR_06774
Sde2_N_Ubi domain-containing protein.
    
 0.907
EGR_10422
Nkap_C domain-containing protein.
   
 0.861
EGR_09977
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
   0.835
EGR_01674
Small nuclear ribonucleoprotein G.
    
   0.831
EGR_06776
U2 small nuclear ribonucleoprotein A.
    
   0.828
EGR_01666
Intron-binding protein aquarius.
    
   0.828
EGR_07536
Pre-mRNA-splicing factor SYF2.
   
  0.815
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.