STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_02775U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (505 aa)    
Predicted Functional Partners:
EGR_07848
Splicing factor U2AF subunit.
   
 0.999
EGR_09672
Cell division cycle 5-related protein.
   
 0.981
EGR_06843
Splicing factor 3B subunit 4.
   
 
0.980
EGR_03864
Splicing factor 3B subunit 2.
   
 
 0.969
EGR_06776
U2 small nuclear ribonucleoprotein A.
   
 
 0.966
EGR_04214
Splicing factor, arginine/serine-rich 4.
   
 0.965
EGR_07151
Splicing factor 3B subunit.
 
 
 
 0.965
EGR_07152
Splicing factor 3B subunit.
 
 
 
 0.964
EGR_05918
Splicing factor, arginine/serine-rich.
   
 0.961
EGR_02847
Splicing factor 3B subunit 3.
   
 0.954
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.