STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_07245Exosome complex exonuclease RRP4. (370 aa)    
Predicted Functional Partners:
EGR_09355
3'-5' exoribonuclease CSL4.
   
 0.999
EGR_00344
Exosome complex exonuclease RRP42.
   
 0.999
EGR_04796
Exosome complex exonuclease RRP41.
   
 0.998
EGR_09011
Exosome complex exonuclease RRP46.
   
 0.998
EGR_04397
Exosome complex exonuclease RRP45.
   
 0.998
EGR_01358
Nuclear nucleic acid-binding protein C1D.
   
 0.993
EGR_01955
HBS1-like protein.
    
 0.971
EGR_08106
Superkiller viralicidic activity 2-like 2.
   
 0.966
EGR_02546
Superkiller viralicidic activity 2-like 2.
   
 0.966
EGR_07292
DIS3-like exonuclease; Belongs to the RNR ribonuclease family.
   
 0.964
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.