STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_04705Mitochondrial ribosomal protein L55. (122 aa)    
Predicted Functional Partners:
EGR_06819
39S ribosomal protein L52.
   
 
 0.953
EGR_09319
28S ribosomal protein S25 mitochondrial.
   
 
 0.945
EGR_03972
Mitochondrial ribosomal protein l43.
   
 
 0.944
EGR_05021
Putative 28S ribosomal protein S16.
   
   0.942
EGR_00313
39S ribosomal protein L51.
   
 
 0.933
EGR_05220
Ribosomal protein S30 mitochondrial.
   
 
 0.932
EGR_04271
39S ribosomal protein L40.
   
 
 0.932
EGR_07396
28S ribosomal protein S14.
   
 
 0.925
EGR_03151
39S ribosomal protein L46 mitochondrial.
   
 
 0.924
EGR_02603
39S ribosomal protein L16 mitochondrial.
   
 0.920
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.