STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_08477CBM21 domain-containing protein. (622 aa)    
Predicted Functional Partners:
EGR_02939
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.911
EGR_04228
Glycogenin-1.
   
 0.672
EGR_00126
Glycogenin-1.
   
 0.672
EGR_10768
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.
   
 0.624
EGR_09601
Alpha-1,3-mannosyltransferase ALG2.
   
 0.624
EGR_07225
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.
   
 0.624
EGR_04314
Asparagine-linked glycosylation protein.
   
 0.624
EGR_04226
Chitobiosyldiphosphodolichol beta-mannosyltransferase.
   
 0.624
EGR_05302
Uncharacterized protein.
   
 0.612
EGR_10786
Nitrogen permease regulator.
    
 0.611
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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