STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_11007Sulfide:quinone oxidoreductase. (147 aa)    
Predicted Functional Partners:
EGR_07078
Sulfide:quinone oxidoreductase.
 
     0.776
EGR_08304
Adrenodoxin-like protein.
  
 0.721
EGR_00678
Adrenodoxin.
  
 0.721
EGR_09178
Cytochrome b5 reductase 4.
  
 
 0.712
EGR_07079
Sulfide:quinone oxidoreductase.
 
     0.642
EGR_06761
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.636
EGR_01749
Thioredoxin reductase 3.
  
 0.605
EGR_01706
Dihydrolipoyl dehydrogenase.
  
 0.605
EGR_03151
39S ribosomal protein L46 mitochondrial.
   
 
 0.567
EGR_10137
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.541
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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