STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_10894Multidrug and toxin extrusion protein. (420 aa)    
Predicted Functional Partners:
EGR_00218
3-hydroxyacyl-CoA dehydrogenase type-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.665
EGR_04609
Mitochondrial Ribonuclease P protein 1.
   
 0.625
EGR_00037
RNA (Guanine-9-)-methyltransferase domain-containing protein.
   
 0.625
EGR_05068
Uncharacterized protein.
  
    0.535
EGR_09272
TATA box-binding protein-like protein 2.
   
  
 0.508
EGR_04879
TATA box-binding protein-like protein.
   
  
 0.508
EGR_02554
TATA-box-binding protein.
   
  
 0.508
EGR_03740
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.488
EGR_02307
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.488
EGR_05325
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.488
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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